[Bioperl-l] dbSNP

Allen Day allenday at ucla.edu
Mon Jun 28 16:15:00 EDT 2004

if you look in the source code of the parser, you'll see that i don't
handle all the information -- only the information which was relevant to
me at the time i wrote the module.  if you need more of the information
parsed out, please submit a patch to the bioperl mailing list (cced here),
or if you already have a cvs account feel free to make the commits


On Mon, 28 Jun 2004, Babenko, Vladimir (NIH/NLM/NCBI) wrote:

>     Allen, hi;
>     Though I work at the origin of dbSNP I'd appreciate if you could shed
> some light on dbSNP usage ;-)
>   Do I take it right that only genomic position is available for the snp in
> dbsnp?
> I know that there is a protein accession in one of the fields? Should I map
> it onto the cds by my self?
>    Looks that there's nothing of the kind...
>     Thank you,
>         Vladimir
> -----------------
> Vladimir Babenko
> Bldg 38A 8S816L
> National Center for Biotechnology Information
> National Library Of Medicine
> National Institute of Health
> Bethesda, 20894
> (v) 301-594-8079
> (f) 301-480-4637

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