[Bioperl-l] hmmpfam report indexing

Jason Stajich jason at cgt.duhs.duke.edu
Mon May 3 09:10:22 EDT 2004

Bio::Index::Blast  is an example of how to do this for BLAST report files,

it would be simple to do the same  searching for the HMMPFAM 1st line
insead of  /^T?BLAST[PNX]/ in the _index_file method.


On Fri, 30 Apr 2004 stephan.rosecker at ish.de wrote:

> Hi,
> has anybody written a script to index hmmpfam reports.
> I'm not a perl guru, so this woud be very usefull for me.
> Regards,
> stephan
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Jason Stajich
Duke University
jason at cgt.mc.duke.edu

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