[Bioperl-l] graphing trees

Sean Davis sdavis2 at mail.nih.gov
Wed Nov 3 12:13:43 EST 2004

Did you look at:


I happen to use R (statistical programming environment), which has some  
stuff for plotting trees (which I don't use).

You might do a web search for "newick tree" to get stuff related to  
newick format and drawing it.

On Nov 3, 2004, at 12:00 PM, Guillaume Rousse wrote:

> Sean Davis wrote:
>> Not a bioperl answer, but you might want to look at:
>> http://search.cpan.org/search?query=graphviz&mode=all
>> Graphviz is a very nice package for dealing with graph visualization.
> It's what I used sofar, however it's not that practical for trees:
> - internal nodes are always visible
> - edges are always directs
> - you can't adjust their length easily

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