[Bioperl-l] Error using Bio::DB::SwissProt

Susan J. Miller sjmiller at email.arizona.edu
Fri Nov 5 18:52:59 EST 2004

When I run this small script:
#!/usr/local/bin/perl -w

use Bio::DB::SwissProt;

$sp = Bio::DB::SwissProt->new();

$seqObj = $sp->get_Seq_by_acc('Q10654');
print $seqObj->display_id() . "\n";

I see the error message:

Use of uninitialized value in substitution (s///) at 
/usr/local/lib/perl5/site_perl/5.6.0/Bio/SeqIO/swiss.pm line 855, 
<STREAM> line 30.


The get_Seq_by_acc works, but I would like to present this to a class 
and not have the error message show up.  Any suggestions?


Susan J. Miller
Biotechnology Computing Facility
Arizona Research Laboratories
Bio West 228
University of Arizona
Tucson, AZ  85721
(520) 626-2597

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