[Bioperl-l] Re:Path to bl2seq

Tomas Marques tomas_marques at hotmail.com
Tue Oct 12 06:37:07 EDT 2004

Hi, after some trials, I've been able to execute bl2seq in windows.


The error was due to Bio::Tools::Run:StandAloneBlast.pm, which is written to
work in Unix only. All the variables point to "bl2seq", and they should
point to a win-executable ("bl2seq.exe").

So I've Hardcoded some of that variables defined in this module ($exe,
$executable), and now it works perfectly.... 


I only wanted to let you know this modification in case some of you work
with windows.... 


Maybe I should move to Linux...



More information about the Bioperl-l mailing list