[Bioperl-l] Help installing BioPerl
popgen23 at mac.com
Mon Sep 13 13:24:18 EDT 2004
Actually the file on the CPAN was:
Maybe that's it? This file with the added "-run-" in the name might be
But, yes "perldoc Bio::Perl" does return the Bio::Perl synopsis.
On Sep 13, 2004, at 11:16 AM, Jason Stajich wrote:
> But are you sure you installed bioperl-1.4.tar.gz....it doesn't sound
> like it.
> Does this return anything?
> % perldoc Bio::Perl
> On Sep 13, 2004, at 12:58 PM, Michael Robeson wrote:
>> In a sense , yes.
>> When I try to run any script using Bio::Perl I get this error:
>> "Can't locate Bio/Perl.pm in @INC".
>> On Sep 13, 2004, at 6:08 AM, Brian Osborne wrote:
>>> Do you mean that the test for Bio::Perl is failing?
>>> Brian O.
>>> -----Original Message-----
>>> From: bioperl-l-bounces at portal.open-bio.org
>>> [mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Michael S.
>>> Robeson II
>>> Sent: Sunday, September 12, 2004 12:16 PM
>>> To: bioperl-l at portal.open-bio.org
>>> Subject: [Bioperl-l] Help installing BioPerl
>>> I have successfully installed BioPerl on several machines running Mac
>>> OS X (10.3.5) w/o any trouble. However one of my machines (same OS)
>>> install is not working. Basically I keep getting "Error 2" problems
>>> the end of an install.
>>> I've used the "perl -MCPAN -eshell" as both a normal user and root
>>> it still does not work. I've tried this while installing the
>>> "Bundle::BioPerl and the "B/BI/BIRNEY/bioperl-run-1.4.tar.gz".
>>> Basically what it amounts to is that I get an error that says "Can't
>>> locate Bio/Perl.pm in @INC". I basically know what this means but I
>>> not so sure how to fix this or what to do.
>>> Any help would be greatly appreciated.
>>> Bioperl-l mailing list
>>> Bioperl-l at portal.open-bio.org
>> Bioperl-l mailing list
>> Bioperl-l at portal.open-bio.org
> Jason Stajich
> jason.stajich at duke.edu
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