[Bioperl-l] how to install clustalw.pm and PAML/* (codeml.pm. yn00..)

szhan at uoguelph.ca szhan at uoguelph.ca
Mon Sep 20 13:55:12 EDT 2004

Hello, Bioperl experts,
Can you please tell me how to install clustalw.pm and PAML::* (such as codeml.pm
yn00.pl on windows XP?
I have run perl5.8 on windows XP and installed bioperl 1.4 using PPM. Now I'd
like to do Multiple Sequence Alignment(MSA) and Phylogenetic Analysis using
Maximum Likelihood (PAML) analyses from within Bioperl like:
use Bio::Tools::Run::Phylo::PAML::Codeml;
use Bio::Tools::Run::Alignment::Clustalw;
Thank you in advance.

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