[Bioperl-l] shell ideas

Jason Stajich jason.stajich at duke.edu
Tue Sep 21 11:05:27 EDT 2004

I guess some of the functions in Bio::Perl as examples of starters.

On Sep 18, 2004, at 3:43 AM, Gabriel Horner wrote:

> Hi all,
>   I'm relatively new to the bioinformatics community. Being an avid 
> perl programmer, I'm wondering what ways I could help contribute to 
> this community. I looked around in the scripts/ and examples/ 
> directories and
> noticed a script bioperl.pl which is a basic shell. Since I specialize 
> in writing shells, I'm
> wondering what modules/functions would be most helpful in a shell 
> environment.
> For starters I would think manipulating sequences,creating images and 
> communicating with remote
> databases would be helpful to have in a shell.
> I would be basing this on a newer version of Fry::Shell.
> Thoughts?
> Thanks,
> Gabriel
> -- 
> my looovely website -- http://www.chwhat.com
> BTW, IF chwhat.com goes down email me at gabriel.horner at cern.ch
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Jason Stajich
jason.stajich at duke.edu

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