[Bioperl-l] Gene positions

Sean Davis sdavis2 at mail.nih.gov
Wed Sep 29 16:03:05 EDT 2004

Probably the easiest way to do this with a fixed set of genes is to use 
the USCS table browser or ensembl mart.  If that won't fit your 
problem, you can set up a local UCSC database, a Bio::DB::GFF database, 
or use the Ensembl perl API.


On Sep 29, 2004, at 10:44 AM, Marques Bonet wrote:

> I'm starting with Bioperl, and I would like to know how obtain the 
> chromosomal position of a list of genes.
> I've been trying some classes, but I've not been able to achieve it. 
> Which will be the easiest way to do it with BIoperl?
> Thanks in advance.
> Reparaciones, servicios a domicilio, empresas, profesionales... Todo 
> en la guía telefónica de QDQ. 
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