[Bioperl-l] Sorting BLAST Output

Waibhav Tembe tembe at bioanalysis.org
Mon Apr 4 12:18:15 EDT 2005

Hello List,

I was wondering if there is any easy way to "sort" the hits in a blast 
output based on something other than the default sort key E value/bits. 
For example, I would like to sort the hits based on the number of 
mismatches or length of the alignments reported.

I considered blast2table utility. But I would like to retain all the 
details in the BLAST output.


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