[Bioperl-l] How to specify alignment view in RemoteBlast

Paul Cantalupo lupey+ at pitt.edu
Wed Apr 27 09:24:44 EDT 2005


I'm using BioPerl 1.4 and I'd like to start using 
Bio::Tools::Run::RemoteBlast to automate my Blast procedures. Blast 
allows several alignment views such as Pairwise which is the default. I 
want to use the 'Hit Table' alignment view so that I can get the output 
in tabular format. How do I specify this in Bio::Tools::Run::RemoteBlast?

Thank you,

Paul Cantalupo

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