[Bioperl-l] Kyte Doolittle hydropathy plot: Bio::Graphics::Glyph::protein

Aaron J. Mackey amackey at pcbi.upenn.edu
Wed Dec 7 08:13:05 EST 2005

I've just checked in to BioPerl the above mentioned glyph, which  
(like Glyph::dna) is a "global feature" glyph that  at high  
magnification shows raw protein sequence, but at lower magnification  
provides the standard Kyte-Doolittle hydropathy plot (adding an  
option to use Hopp-Woods scale is left as an exercise to the reader).

You can see an example of using this glyph at:




Aaron J. Mackey, Ph.D.
Project Manager, ApiDB Bioinformatics Resource Center
Penn Genomics Institute, University of Pennsylvania
email:  amackey at pcbi.upenn.edu
office: 215-898-1205 (Biology, 212 Goddard Labs)
         215-746-7018 (PCBI, 1428 Blockley Hall)
fax:    215-746-6697 (Penn Genomics Institute)
postal: Penn Genomics Institute
         Goddard Labs 212
         415 S. University Avenue
         Philadelphia, PA  19104-6017

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