[Bioperl-l] Bio::DB::GenBank

Allen Liu axl163 at yahoo.com
Fri Feb 18 16:56:33 EST 2005


I have used the sample script that extracts the GB
file and the sequence.  To extract the DNA sequence, I

$dnaseq = $seqobj->seq();

However, how does acquire the translation product of
the coding region.  The reason why I need to implement
this step is because I cannot simply blast with:

my $blast_result = blast_sequence($seqobj);

Any information would be greatly appreciated.

Allen Liu

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