[Bioperl-l] use cases for SeqWithQuality, please
heikki at ebi.ac.uk
Thu Jul 7 05:13:45 EDT 2005
I've compared Bio::Seq::SeqWithQuality with Bio::Seq::MetaI schema and there
does not seem to be too many differences. All the functionality seems to be
there already. The main problem is that there are many different ways to call
There are so many ways to call it and some methods are already depreciated
that it would be better to write a replacement module than try to rewrite all
Could I ask those who use Bio::Seq::SeqWithQuality now to send be sample code
that shows how they call this module in practise.
With that information I could write a Bio::Seq::Quality that implements
Bio::Seq::MetaI and we could depreciate Bio::Seq::SeqWithQuality.
Are you happy with that, Chad?
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_/ _/ _/ Heikki Lehvaslaiho heikki at_ebi _ac _uk
_/_/_/_/_/ EMBL Outstation, European Bioinformatics Institute
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_/ _/ _/ Cambridge, CB10 1SD, United Kingdom
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