[Bioperl-l] Re: bioperl-run Codeml.pm fix_blength

Albert Vilella avilella at gmail.com
Tue Jul 12 11:40:41 EDT 2005

El dt 12 de 07 del 2005 a les 11:28 -0400, en/na Jason Stajich va
> sure - fix away.


Also, in my pipeline it would be interesting to call Codeml.pm via
bioperl keeping the tempfiles in a specified directory:

I understand that save_tempfiles will save the generated tempfiles in
the temp directory, the dir will remain in $tempdir.
An $outdir could be specified so that the codeml run is saved where the
user specifies.

What do you think?


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