[Bioperl-l] getting pubmed id from genbank files

Nathan Haigh n.haigh at sheffield.ac.uk
Tue Jul 26 09:02:49 EDT 2005

I want to be able to supply a list of GI's, retrieve the genbank files and
parse out the pubmed id's.


I know I can do the first steps of retrieving the genbank files directly,
but how do I get the pubmed id's? I've been playing around with things and
haven't yet found out if this can be done.






Nathan Haigh

Bioinformatics PostDoctoral Research Associate


Room B2 211

Department of Animal and Plant Sciences

University of Sheffield

Western Bank


S10 2TN


Tel: +44 (0)114 22 20112

Mob: +44 (0)7742 533 569

Fax: +44 (0)114 22 20002


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