[Bioperl-l] parsing blast output

Tuan A. Tran tuantran167 at gmail.com
Sat Jun 18 01:42:41 EDT 2005


When I blasted my query sequence against a database, the got the
following line (for example)

>3R type=chromosome; loc=3R:1..27905053; ID=3R; release=r4.1; species=dmel

Using bioperl module, 
 $blast_report = $factory->blastall($query);
I can extract some information like ID = 3R using

 If I want to keep the entire line as show above what should I do? Is
there a module in bioperl? I really appreciate if someone can tell me
how to do it.


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