[Bioperl-l] uniprot flatfile extraction

SG Edwards s0460205 at sms.ed.ac.uk
Wed Mar 9 09:24:05 EST 2005

Hi, sorry if this is basic but I've read the documentation and am still

I wish to extract uniprot flatfile data into my database. I want to get the
following variables:

Protein ID, length, description, molecular weight, sequence, comments, cross
references, disulphide bonds, species, entered date, last modified, last
annotated, protein synonyms.

I know that I can get some of these (e.g. protein ID, length) using Bioperl but
can I get all of the data also or am I better writing my own from scratch?


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