[Bioperl-l] A question about flatting taxonomy database

Jason Stajich jason.stajich at duke.edu
Sun Mar 27 17:58:16 EST 2005

Can you show the command line argument that you passing in? You need to tell 
the script where to find these files.

Jason Stajich
jason.stajich at duke.edu

Quoting zhoujie at fudan.edu.cn:

> Hi all,
> When I'm using "bp_local_taxonomydb_query.pl" to build a local 
> taxonomy database and query it, I always get a exception saying:"no 
> such file or directory ***, STACK ***", it seems that the nodes file, 
> id2names and names2id files are already created, but how does the 
> error MSG arise? I have already installed the BerkeleyDB module by 
> ppm. Is there anything else that I need to do?
> Thanks very much for you help.
> J Z
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l

More information about the Bioperl-l mailing list