[Bioperl-l] Location mapping question

Sean Davis sdavis2 at mail.nih.gov
Wed Nov 9 13:17:36 EST 2005

I think I have seen code to do this kind of thing--hence this email--but I
may be mistaken.  I have oligo sequences mapped to mRNAs by blat and have
blat alignments to the genome.  Is there a way to quickly align the oligos
to the genome given this information using a bioperl module.  (Like I said,
I just can't seem to find it).


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