[Bioperl-l] load in biosql a genome genbank file

Hilmar Lapp hlapp at gmx.net
Wed Nov 16 05:41:42 EST 2005

The genome is in genbank format, right? Generally speaking there is 
little limit on what you can load into BioSQL; if you are referring to 
load_seqdatabase.pl, it can load any format that's understood by the 
Bio::SeqIO system in Bioperl.

Let me know if you were thinking about something else.


On Nov 8, 2005, at 3:26 AM, Guido Dieterich wrote:

> Hi
> is it possible to load into biosql a complete bacterial genome genbank
> file
> from ftp://ftp.ncbi.nlm.nih.gov/genomes/Bacteria/
> Best regards
> Guido
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757

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