[Bioperl-l] Problem with bioperl installation

John Slimick slimick at warren.upb.pitt.edu
Thu Nov 17 15:43:09 EST 2005


I have tried to install Bioperl for use in
one of my classes, but I have found a roadblock.
I have installed current Bioperl by using
the CPAN route and also using the "make"
approach. This is on a RH 9.0 system.
I get the same error on either installation.

Here is the file I wished to test (from the Bioperl

#!/usr/bin/perl -w
use strict;

use Bio::Perl;

$seq_object = get_sequence('swiss',"ROA_HUMAN");


I get the following message:

    Can't locate Bio/Perl.pm in @INC( @INC contains ,,long file list)

When I do:

    $ find / -name Perl.pm -print

as _root_ all I get is a single hit


Any thoughts?

Thanks in advance.

john slimick
slimick at pitt.edu

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