[Bioperl-l] Problem with bioperl installation
bmoore at genetics.utah.edu
Sun Nov 20 13:35:27 EST 2005
I doesn't sound like your installation succeeded. Did you get errors
with make install? Do you know where locate perl modules are installed
on yours system (/usr/lib/perl5/site_perl/5.8.5/ on my system)? If so
is there a Bio directory there? Can you give us more details on your
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org] On Behalf Of John Slimick
Sent: Thursday, November 17, 2005 1:43 PM
To: bioperl-l at bioperl.org
Subject: [Bioperl-l] Problem with bioperl installation
I have tried to install Bioperl for use in
one of my classes, but I have found a roadblock.
I have installed current Bioperl by using
the CPAN route and also using the "make"
approach. This is on a RH 9.0 system.
I get the same error on either installation.
Here is the file I wished to test (from the Bioperl
$seq_object = get_sequence('swiss',"ROA_HUMAN");
I get the following message:
Can't locate Bio/Perl.pm in @INC( @INC contains ,,long file list)
When I do:
$ find / -name Perl.pm -print
as _root_ all I get is a single hit
Thanks in advance.
slimick at pitt.edu
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