[Bioperl-l] producing an organism report from BLAST results?

Jason Stajich jason.stajich at duke.edu
Tue Nov 22 09:25:46 EST 2005

Tim  -
Will have to consult other members of the list for StandAloneBlast  
and RemoteBlast help, sorry.

On Nov 21, 2005, at 5:04 PM, Tim Reid wrote:

> i am using NCBI-BLAST by way of Bio::Tools::Run::RemoteBlast.
> i tried adding "-I" =>'T' to the @params used to instantiate my  
> RemoteBlast object, but this did not work.
> further help appreciated. can you tell me if StandAloneBlast  
> supports the use of NCBI's netblast? i couldn't tell, but if it  
> does that could be another option.
> thanks.

Jason Stajich
Duke University

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