[Bioperl-l] Genbank parser
bli1 at bcm.tmc.edu
Sun Oct 30 20:35:52 EST 2005
I am new to Bioperl and recently found it has a lot of useful
modules. I wrote a perl script to extract all protein sequences and
corresponding coding sequences from Genbank files. But I found some
bugs and it's hard to make sue my script is bug free after several
revision. I am wondering if there are some modules and specific
functions to use to fulfill my requirement. Does anybody have similar
code to share with? Most bugs come from multiple segments of coding
sequences and some cds sequences are on the minus strand.
Thanks a lot!
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