[Bioperl-l] Genbank parser

Bingshan Li bli1 at bcm.tmc.edu
Sun Oct 30 20:35:52 EST 2005

Hi All,

I am new to Bioperl and recently found it has a lot of useful  
modules. I wrote a perl script to extract all protein sequences and  
corresponding coding sequences from Genbank files. But I found some  
bugs and it's hard to make sue my script is bug free after several  
revision. I am wondering if there are some modules and specific  
functions to use to fulfill my requirement. Does anybody have similar  
code to share with? Most bugs come from multiple segments of coding  
sequences and some cds sequences are on the minus strand.

Thanks a lot!

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