[Bioperl-l] RemoteBlast save_output does not handle -m8 output correctly

Paul G Cantalupo lupey+ at pitt.edu
Thu Sep 1 14:58:31 EDT 2005


I'm using bioperl-1.4 and I noticed that RemoteBlast save_output method 
creates an empty file (zero bytes) when dealing with blast -m8 output 
(i.e. ALIGNMENT_VIEW = Tabular). Is there a fix for this?

Thank you,


Paul Cantalupo
Research Specialist/Systems Programmer
559 Crawford Hall
Department of Biological Sciences
University of Pittsburgh
Pittsburgh, PA 15260
Work: 412-624-4687
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