[Bioperl-l] problems with blast parser

Alessandro S. Nascimento asnascimento at if.sc.usp.br
Tue Apr 4 11:28:26 EDT 2006


Hi all

I'm trying to parse a blast standalone (blaspgp) result file and filter 
some sequences using length and identity. The script used to work but 
this time after several minutes working in 99.9% of my processor I have  
a "killed"message with no more information. The blast file is very 
large. Does anyone have any clue ?

Thanks in advance

Alessandro


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