[Bioperl-l] BLAST and parsing question

Robert Murphy robertemurphy at hotmail.com
Mon Apr 24 10:12:09 EDT 2006

Yes, that's basically it.  Find out which 20 unit long subsequences of my 
sequence are not found in my database.


So you want all length 20 subsequences (derived using a sliding window
from some set of sequences) which are do not appear in some other set of
sequences (virus-db) ?

Torsten Seemann <torsten.seemann at infotech.monash.edu.au>
Victorian Bioinformatics Consortium

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