April 2006 Archives by date

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Starting: Sat Apr 1 01:54:45 EDT 2006
Ending: Fri Apr 28 09:14:35 EDT 2006
Messages: 144

[Bioperl-l] Issue with Bio::SearchIO::psl (was: Bioperl bug 1977) Chris Fields
[Bioperl-l] possible bug printing GenBank feature qualfiers Hilmar Lapp
[Bioperl-l] possible bug printing GenBank feature qualfiers Chris Fields
[Bioperl-l] PAML 3.15 parsing Jason Stajich
[Bioperl-l] possible bug printing GenBank feature qualfiers Scott Markel
[Bioperl-l] biosql-schema CVS problems Chris Fields
[Bioperl-l] biosql-schema CVS problems Jason Stajich
[Bioperl-l] biosql-schema CVS problems Chris Fields
[Bioperl-l] Issue with Bio::SearchIO::psl (was: Bioperl bug 1977) Albert Vernon Smith
[Bioperl-l] problems with blast parser Alessandro S. Nascimento
[Bioperl-l] FW: Issue with Bio::SearchIO::psl (was: Bioperl bug 1977) Chris Fields
[Bioperl-l] mailing list summaries Chris Fields
[Bioperl-l] Getting sequences by ID Yuval Itan
[Bioperl-l] Getting sequences by ID Torsten Seemann
[Bioperl-l] Issue with Bio::SearchIO::psl (was: Bioperl bug 1977) Chris Fields
[Bioperl-l] MeltDNA: A software to prediction of DNA duplex stability and thermodynamics. ch01ph14 at uohyd.ernet.in
[Bioperl-l] MeltDNA: A software to prediction of DNA duplex stability and thermodynamics. Sean Davis
[Bioperl-l] cut_seq in Bio::Tools::RestrictionEnzyme Staffa, Nick (NIH/NIEHS) [C]
[Bioperl-l] nt frequencies at 4 fold degenerate sites Nathan S. Haigh
[Bioperl-l] StandAloneBlast on pre-formatted GenBank nt database Georg Otto
[Bioperl-l] Getting sequences by ID Ryan Golhar
[Bioperl-l] problems with blast parser Chris Fields
[Bioperl-l] Getting sequences by ID Yuval Itan
[Bioperl-l] cut_seq in Bio::Tools::RestrictionEnzyme Chris Fields
[Bioperl-l] problems with blast parser Jason Stajich
[Bioperl-l] problems with blast parser Chris Fields
[Bioperl-l] Issue with Bio::SearchIO::psl (was: Bioperl bug 1977) Chris Fields
[Bioperl-l] MeltDNA: A software to prediction of DNA duplex stability and thermodynamics. Torsten Seemann
[Bioperl-l] Minor Bio::Tools::Run::Alignment::Muscle update Jordan Mark Swanson
[Bioperl-l] Problem in getting sbjctseq using remote Blast Sonmitra Mondal
[Bioperl-l] trap warnings in eval? Albert Vilella
[Bioperl-l] trap warnings in eval? Chris Fields
[Bioperl-l] trap warnings in eval? Heikki Lehvaslaiho
[Bioperl-l] Interpretation of percentage_idendity Jason Stajich
[Bioperl-l] Bio::Restriction::Enzyme exception due to Bio::PrimarySeq Staffa, Nick (NIH/NIEHS) [C]
[Bioperl-l] Problem in getting sbjctseq using remote Blast Chris Fields
[Bioperl-l] Minor Bio::Tools::Run::Alignment::Muscle update Albert Vilella
[Bioperl-l] Bio::Restriction::Enzyme exception due to Bio::PrimarySeq Staffa, Nick (NIH/NIEHS) [C]
[Bioperl-l] Bio::Restriction::Enzyme exception due to Bio::PrimarySeq Brian Osborne
[Bioperl-l] Display of gff annotation Marco Blanchette
[Bioperl-l] Display of gff annotation Scott Cain
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails e.rapsomaniki at mail.cryst.bbk.ac.uk
[Bioperl-l] Display of gff annotation Marco Blanchette
[Bioperl-l] SimpleAlign Question Iain Wallace
[Bioperl-l] Bio::Restriction::Enzyme exception due toBio::PrimarySeq Chris Fields
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Chris Fields
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Chris Fields
[Bioperl-l] GFF3 Validator Lincoln Stein
[Bioperl-l] primer pair sequence search Kevin Victor
[Bioperl-l] GFF3 Validator Andrew Dalke
[Bioperl-l] Getting sequences by ID Amir Karger
[Bioperl-l] primer pair sequence search Donald Jackson
[Bioperl-l] SimpleAlign Question Brian Osborne
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Eleni Rapsomaniki
[Bioperl-l] BioPerl Mailing List Summaries Chris Fields
[Bioperl-l] BioPerl Mailing List Summaries Brian Osborne
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Chris Fields
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Brian Osborne
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Chris Fields
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Torsten Seemann
[Bioperl-l] BioPerl Mailing List Summaries Hilmar Lapp
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Eleni Rapsomaniki
[Bioperl-l] retrieving top_SeqFeatures for RefSeq proteins fails Brian Osborne
[Bioperl-l] primer pair sequence search Maximilian Haeussler
[Bioperl-l] Bio::AlignIO ignores questionmarks? Kai Müller
[Bioperl-l] [SO-devel] GFF3 Validator Suzanna Lewis
[Bioperl-l] [SO-devel] GFF3 Validator chris mungall
[Bioperl-l] Bio::AlignIO ignores questionmarks? David Messina
[Bioperl-l] problem with needle madhurima bhattacharjee
[Bioperl-l] Bio::AlignIO ignores questionmarks? Albert Vilella
[Bioperl-l] Bio::AlignIO ignores questionmarks? David Messina
[Bioperl-l] Bio::AlignIO ignores questionmarks? Chris Fields
[Bioperl-l] problem with needle Mauricio Herrera Cuadra
[Bioperl-l] Bio::AlignIO ignores questionmarks? Chris Fields
[Bioperl-l] Bio::AlignIO ignores questionmarks? Chris Fields
[Bioperl-l] FW: Bioperl PAML bug Chris Fields
[Bioperl-l] BioPerl Mailing List Summaries Amir Karger
[Bioperl-l] PSI-BLAST parsing fails on Windows David Waner
[Bioperl-l] PSI-BLAST parsing fails on Windows Chris Fields
[Bioperl-l] Input for Bio::CodonUsage::IO Marc Logghe
[Bioperl-l] Genbank parsing using Bioperl Prabu R
[Bioperl-l] Input for Bio::CodonUsage::IO Brian Osborne
[Bioperl-l] Genbank parsing using Bioperl Sean Davis
[Bioperl-l] Genbank parsing using Bioperl Prabu R
[Bioperl-l] Input for Bio::CodonUsage::IO Marc Logghe
[Bioperl-l] StandAloneBlast in Windows Bornman, Daniel M
[Bioperl-l] Genbank parsing using Bioperl Chris Fields
[Bioperl-l] StandAlone BLAST on Windows Bornman, Daniel M
[Bioperl-l] StandAlone BLAST on Windows??? Bornman, Daniel M
[Bioperl-l] StandAlone BLAST on Windows??? Chris Fields
[Bioperl-l] StandAlone BLAST on Windows??? Bornman, Daniel M
[Bioperl-l] StandAlone BLAST on Windows??? Barry Moore
[Bioperl-l] StandAlone BLAST on Windows??? Alexander Kozik
[Bioperl-l] StandAlone BLAST on Windows??? Bornman, Daniel M
[Bioperl-l] StandAlone BLAST on Windows??? Chris Fields
[Bioperl-l] StandAloneBlast in Windows Chris Fields
[Bioperl-l] StandAlone BLAST on Windows??? Brian Osborne
[Bioperl-l] Input for Bio::CodonUsage::IO Brian Osborne
[Bioperl-l] Genbank parsing using Bioperl Sean Davis
[Bioperl-l] Input for Bio::CodonUsage::IO Brian Osborne
[Bioperl-l] Speed of bioperl mailing list distribution Torsten Seemann
[Bioperl-l] Speed of bioperl mailing list distribution Chris Fields
[Bioperl-l] Speed of bioperl mailing list distribution Jason Stajich
[Bioperl-l] BLAST and parsing question Robert Murphy
[Bioperl-l] BLAST and parsing question Torsten Seemann
[Bioperl-l] invalid species name error handling Stefano Ghignone
[Bioperl-l] BLAST and parsing question Robert Murphy
[Bioperl-l] invalid species name error handling Mauricio Herrera Cuadra
[Bioperl-l] RSS feed weirdness from the wiki Chris Fields
[Bioperl-l] RSS feed weirdness from the wiki Mauricio Herrera Cuadra
[Bioperl-l] invalid species name error handling Heikki Lehvaslaiho
[Bioperl-l] How to merge mulitple genbank records into one record Haiming Wang
[Bioperl-l] RSS feed weirdness from the wiki Chris Fields
[Bioperl-l] RSS feed weirdness from the wiki Jason Stajich
[Bioperl-l] How to merge mulitple genbank records into one record Brian Osborne
[Bioperl-l] How to merge mulitple genbank records into one record Haiming Wang
[Bioperl-l] How to merge mulitple genbank records into one record Haiming Wang
[Bioperl-l] How to merge mulitple genbank records into one record Haiming Wang
[Bioperl-l] RSS feed weirdness from the wiki Jason Stajich
[Bioperl-l] BLAST and parsing question Torsten Seemann
[Bioperl-l] RSS feed weirdness from the wiki Mauricio Herrera Cuadra
[Bioperl-l] BLAST and parsing question Marc Logghe
[Bioperl-l] Installation problem Reena Yadav
[Bioperl-l] RSS feed weirdness from the wiki Jason Stajich
[Bioperl-l] ListSummaries for April 12-25 Chris Fields
[Bioperl-l] blast program to run locally on windows Raghunath Verabelli
[Bioperl-l] ListSummaries for April 12-25 Mauricio Herrera Cuadra
[Bioperl-l] blast program to run locally on windows Chris Fields
[Bioperl-l] ListSummaries for April 12-25 Roy Chaudhuri
[Bioperl-l] BLAST and parsing question Robert Murphy
[Bioperl-l] ListSummaries for April 12-25 Hilmar Lapp
[Bioperl-l] blast program to run locally on windows Raghunath Verabelli
[Bioperl-l] Installation problem Torsten Seemann
[Bioperl-l] BLAST and parsing question Torsten Seemann
[Bioperl-l] BLAST and parsing question Marc Logghe
[Bioperl-l] BLAST and parsing question Robert Murphy
[Bioperl-l] Using bioperl to convert gene predictions to gff Mark Gosink
[Bioperl-l] GI identifier missing when using Bio::Index::GenBank? Todd Richmond
[Bioperl-l] GI identifier missing when using Bio::Index::GenBank? Brian Osborne
[Bioperl-l] GI identifier missing when using Bio::Index::GenBank? Todd Richmond
[Bioperl-l] GI identifier missing when using Bio::Index::GenBank? Brian Osborne
[Bioperl-l] Bio::Tools::GFF Paul Mooney
[Bioperl-l] Bio::Tools::GFF Chris Fields
[Bioperl-l] Bio::Tools::GFF Scott Cain

Last message date: Fri Apr 28 09:14:35 EDT 2006
Archived on: Sat Apr 29 06:10:55 EDT 2006

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