bix at sendu.me.uk
Tue Aug 1 02:49:54 EDT 2006
Andreo Beck wrote:
> Can $hit_object->frac_aligned_hit or $hit_object->frac_aligned_query give outputs > 1 ?
> I get some > 1 values.
That might depend on what $hit_object is (Bio::Search::Hit::GenericHit
?), but I'd say it's probably a bug if you get over 1. Can you give an
example where you got over 1? Provide the code and the input data.
> Does using the parentheses (e.g. $hit_object->frac_aligned_hit()) make any difference?
No, empty parentheses are only needed to make it clear to the perl
interpreter you are calling a subroutine in ambiguous cases;
$obj->method isn't ambiguous.
More information about the Bioperl-l