[Bioperl-l] Genes from MySQL database using Bio::DB::GFF

Chris Fields cjfields at uiuc.edu
Thu Aug 17 10:03:31 EDT 2006


On Aug 17, 2006, at 12:54 AM, Scott Cain wrote:

> ...
> You could try Bio::DB::SeqFeature (loaded with bp_seqfeature_load.pl)
> which was designed to work with GFF3 files.  Welcome to the bleeding
> edge :-)
>
> Scott

Speaking of, I had recently posted that we're planning on a new  
developer release (1.5.2).  Is Bio::DB::SeqFeature stable enough  
(i.e. not too bleeding-edge) to include?

Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign





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