[Bioperl-l] different syntaxes for SeqI constructor and Factory constructor?
cjfields at uiuc.edu
Thu Dec 7 14:44:19 EST 2006
On Dec 7, 2006, at 1:32 PM, Brian Osborne wrote:
> The latest StandAloneBlast takes "dashed parameters", as in:
> @params = (-database => 'swissprot',-outfile => 'blast1.out');
> $factory = Bio::Tools::Run::StandAloneBlast->new(@params);
> my $factory = Bio::Tools::Run::StandAloneBlast->new(-program
> -e => 1e-20);
> So that's why I asked "what version?"
> Someone made the change to allow dashes in @params a few months ago
> and I
> believe that that someone was you!
> Brian O.
Nope, I plead innocent (at least to this!). I haven't made any
commits to StandAloneBlast. These were added in by Torsten (see
commits 1.59, 1.60), so you'll need to blame/thank him...
So they're now a bit more consistent. That's not to say
StandAloneBlast doesn't need some major revisions....
BTW, I didn't see a post from you asking about the version.
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