[Bioperl-l] BLAST reports

David Messina dmessina at wustl.edu
Tue Dec 12 13:44:29 EST 2006


Hi Keith,

Take a look at:
http://www.bioperl.org/wiki/HOWTO:SearchIO

You can read in a whole bunch of different blast formats (see Table  
1), and it is possible to write out in HTML. See:

http://www.bioperl.org/wiki/HOWTO:SearchIO#Writing_and_formatting_output


I'm not sure what you mean by the most informative blast output. If  
you mean which one gives the most information, I'm pretty sure the  
standard Blast report has everything.


Dave



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