[Bioperl-l] Bio::SeqFeature::Annotated and mandatory type checking
vaughn at cshl.edu
Thu Dec 14 14:09:34 EST 2006
I'm trying to bring some of my code into compliance with the BioPerl
1.5.2 and am running into some design decisions that I am unclear on.
Can I ask why Bio::SeqFeature::Annotated enforces mandatory checking
of the 'type' against SOFA? It seems to me that this should be
optional behavior as is the case with the Bio::FeatureIO family. I'd
be happy to write the patch if there is any agreement with me on this
Matthew W. Vaughn, Ph.D.
Cold Spring Harbor Laboratory
1 Bungtown Road
Cold Spring Harbor, NY 11724
phone: (516) 367-8469
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