[Bioperl-l] module to find out primer binding sites in a genome sequence

Gowthaman Ramasamy gowthaman.ramasamy at sbri.org
Mon Dec 18 17:19:09 EST 2006


Hi List,
Is there any module in bioperl which can find out the primer binding sites in a genomic sequence.
I am interested in finding locations with few mismatches along the primer...not just the exact match (which is a very trivial task)

Many thanks in advance,
gowtham



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