[Bioperl-l] module to find out primer binding sites in a genome sequence

Torsten Seemann torsten.seemann at infotech.monash.edu.au
Mon Dec 18 18:52:58 EST 2006

Gowthaman Ramasamy wrote:
> Hi List,
> Is there any module in bioperl which can find out the primer binding sites in a genomic sequence.
> I am interested in finding locations with few mismatches along the primer...not just the exact match (which is a very trivial task)

This FAQ question may help:

This software may help:

Dr Torsten Seemann               http://www.vicbioinformatics.com
Victorian Bioinformatics Consortium, Monash University, Australia

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