[Bioperl-l] standalone blast composition based statistics parameter
torsten.seemann at infotech.monash.edu.au
Sat Feb 4 22:34:35 EST 2006
> Does anybody know whether it is possible to perform a with the
> standalone blast a database search where the composition based
> statistics parameter is on
> and what's the abbreviation for the parameter
The StandAloneBlast only runs the "blastall" binary on your system. It
accepts all the command line options (like "-d" etc.) that "blastall"
does but just passes them as-is; it doesn't do anything special.
On a Unix system, type "blastall -" to list all the options that your
BLAST binary supports.
Victorian Bioinformatics Consortium, Monash University, Australia
Phone: +61 3 9905 9010
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