olenka.m at gmail.com
Thu Feb 9 17:49:48 EST 2006
Probably a very stupid question, but the get_lca function does not
work for unrooted trees, does it?
I am trying to get the LCA for a set of nodes in a phylip tree, and I
am using the script in the HOWTO.
On 2/8/06, Hubert Prielinger <hubert.prielinger at gmx.at> wrote:
> If I want to parse a Blast Output (Version 2.2.12) with Bio::SearchIO,
> I get the following error message:
> MSG: no data for midline Query 1 WWWKWRW 7
> STACK Bio::SearchIO::blast::next_result
> STACK toplevel
> is that a bug......
> If I want to parse Blast Output (version 2.2.13), I don't get anything.....
> I'm using bioperl 1.4
> before, I have installed bioperl 1.4, it worked fine parsing Blast
> Output (version 2.2.12), but I don't remember which bioperl version I
> had installed
> thanks in advance
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