[Bioperl-l] Error using Bio::Matrix::GenericMatrix

Jason Stajich jason.stajich at duke.edu
Tue Feb 14 23:10:56 EST 2006


try:
use Bio::Matrix::Generic;

Apparently I screwed up the SYNOPSIS.  fixed that just now.

-jason
On Feb 14, 2006, at 10:54 PM, Sam Al-Droubi wrote:

> All,
>
>  I am trying to use Bio::Matrix::GenericMatrix module.
>  I simply put this line in my program:
>      use Bio::Matrix::GenericMatrix;
>
>  but I get the followin error:
>
>  Can't locate Bio/Matrix/GenericMatrix.pm in @INC (@INC contains: / 
> usr/lib/perl5/5.8.6/i586-linux-thread-multi /usr/lib/perl5/5.8.6 / 
> usr/lib/perl5/site_perl/5.8.6/i586-linux-thread-multi /usr/lib/ 
> perl5/site_perl/5.8.6 /usr/lib/perl5/site_perl /usr/lib/perl5/ 
> vendor_perl/5.8.6/i586-linux-thread-multi /usr/lib/perl5/ 
> vendor_perl/5.8.6 /usr/lib/perl5/vendor_perl .) at sf.pl line 18.
>  BEGIN failed--compilation aborted at sf.pl line 18.
>
>  I found this module using find which is called Generic.pm in this  
> directory
>      /usr/lib/perl5/site_perl/5.8.6/Bio/Matrix
>
>  Could someone tell me why it is not working.  I have no trouble  
> including these modules in my file.
>      use Bio::SeqIO;
>      use Bio::DB::GenBank;
>
>  Thank you.
>
>
>
> Sincerely,
> Sam Al-Droubi, M.S.
> saldroubi at yahoo.com
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l

--
Jason Stajich
Duke University
http://www.duke.edu/~jes12




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