[Bioperl-l] Bio::AlignIO::metafasta tests

Heikki Lehvaslaiho heikki at sanbi.ac.za
Tue Jun 6 03:40:06 EDT 2006


Chris,

I am mystified. I'll try to get the massive 'return undef' change done first 
and the have an other look.

	-Heikki

On Friday 02 June 2006 21:13, Chris Fields wrote:
> Heikki,
>
> I uncovered a weird bug concerning Bio::AlignIO::metafasta which popped up
> when running AlignIO.t (I was fixing bug 2000):
>
> http://bugzilla.open-bio.org/show_bug.cgi?id=2016
>
> Not sure what's going on there but using read_aln and write_aln seem to
> work normally.  It may have something to do with Bio::SimpleAlign but I'm
> not absolutely sure.
>
> Any ideas what may be going on here?
>
> Christopher Fields
> Postdoctoral Researcher - Switzer Lab
> Dept. of Biochemistry
> University of Illinois Urbana-Champaign
>
>
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     _/  _/  _/  Heikki Lehvaslaiho    heikki at_sanbi _ac _za
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