[Bioperl-l] For CVS developers-potentialpitfall with "return undef"

Heikki Lehvaslaiho heikki at sanbi.ac.za
Thu Jun 8 04:49:38 EDT 2006


Looks like we survived the sweeping change - and fixed a number of existing 
bugs in the process. Thanks for everyone who helped!

	-Heikki 

On Thursday 08 June 2006 02:50, David Messina wrote:
> Thanks for letting me know, Chris.
>
> Here's a new round of results on bioperl-live checked out moments ago:
> [OS X 10.4.6, perl 5.8.6]
>
> Failed Test   Stat Wstat Total Fail  Failed  List of Failed
> ------------------------------------------------------------------------
> -------
> t/DBCUTG.t                  29    5  17.24%  26 30-32
> t/LocusLink.t               23    1   4.35%  23
> t/PopGen.t                  89    1   1.12%  85
> t/psm.t        255 65280    48   35  72.92%  29 32-48
> t/tutorial.t                21   15  71.43%  7-21
> 121 subtests skipped.
> Failed 5/232 test scripts, 97.84% okay. 34/11099 subtests failed,
> 99.69% okay.
>
> Fixed since earlier today
> =========================
> Annotation.t
> PhysicalMap.t
> TaxonTree.t
> alignUtilities.t
>
> New since earlier today
> =======================
> PopGen.t
>
> t/PopGen.....................FAILED test 85
>          Failed 1/89 tests, 98.88% okay (less 2 skipped tests: 86
> okay, 96.63%)
>
> Unchanged
> =========
> DBCUTG.t
> LocusLink.t
> psm.t
> tutorial.t
>
> Remote-server tests were run like before. I forgot to mention last
> time that I skipped the local DB tests and I don't have bioperl-ext
> installed, so several staden-related tests were also skipped.
>
> Dave
>
> My results from earlier today for reference:
> > Failed Test        Stat Wstat Total Fail  Failed  List of Failed
> > ----------------------------------------------------------------------
> > --
> > -------
> > t/Annotation.t                   89    2   2.25%  79 88
> > t/DBCUTG.t                       29    5  17.24%  26 30-32
> > t/LocusLink.t                    23    1   4.35%  23
> > t/PhysicalMap.t                  14    2  14.29%  11-12
> > t/TaxonTree.t                    17   30 176.47%  11 18-42
> > t/alignUtilities.t                9    1  11.11%  9
> > t/psm.t             255 65280    48   35  72.92%  29 32-48
> > t/tutorial.t                     21   15  71.43%  7-21
> > 114 subtests skipped.
> > Failed 8/232 test scripts, 96.55% okay. 18/11057 subtests failed,
> > 99.84% okay.
>
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-- 
______ _/      _/_____________________________________________________
      _/      _/
     _/  _/  _/  Heikki Lehvaslaiho    heikki at_sanbi _ac _za
    _/_/_/_/_/  Associate Professor    skype: heikki_lehvaslaiho
   _/  _/  _/  SANBI, South African National Bioinformatics Institute
  _/  _/  _/  University of Western Cape, South Africa
     _/      Phone: +27 21 959 2096   FAX: +27 21 959 2512
___ _/_/_/_/_/________________________________________________________


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