[Bioperl-l] newbie tries StandAloneBlast and receives "cant open BLOSUM62"
cjfields at uiuc.edu
Thu Mar 2 11:20:45 EST 2006
I made changes to the wiki install file to show examples of setting up env
variables in Windows to clear up any confusion:
Postdoctoral Researcher - Switzer Lab
Dept. of Biochemistry
University of Illinois Urbana-Champaign
> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-
> bounces at lists.open-bio.org] On Behalf Of Harald
> Sent: Thursday, March 02, 2006 8:09 AM
> To: Chris Fields
> Cc: bioperl-l at lists.open-bio.org; 'Torsten Seemann'
> Subject: Re: [Bioperl-l] newbie tries StandAloneBlast and receives "cant
> open BLOSUM62"
> The cause for my problem was that I had no BLASTDIR set. Now that this
> path is on my PATH-environment variable all is fine, although my
> ncbi.ini points to the data-directory in a UNIX-like format.
> >Torsten's right. This is what I have for BLASTDIR:
> >C:\Documents and Settings\Administrator>echo %BLASTDIR%
> >Christopher Fields
> >Postdoctoral Researcher - Switzer Lab
> >Dept. of Biochemistry
> >University of Illinois Urbana-Champaign
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