[Bioperl-l] parsing blast results : how to get the length of the proteinseq

Jason Stajich jason.stajich at duke.edu
Fri Mar 10 15:49:29 EST 2006


See the SearchIO HOWTO it tells you all of that.

On Mar 10, 2006, at 2:40 PM, Hubert Prielinger wrote:

> hi,
> in a blast result file there is written the the length of the entire
> protein, how is it possible to parse it, because $hsp->length is the
> length of the matched part
> regards
> Hubert
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Jason Stajich
Duke University

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