[Bioperl-l] cannot find path to wublast

Torsten Seemann torsten.seemann at infotech.monash.edu.au
Wed Mar 22 22:19:06 EST 2006


> -------------------- WARNING ---------------------
> MSG: cannot find path to wublast
> ---------------------------------------------------

> BEGIN { $ENV{PATH} = '/home/wustl/wu-blast'; }

> @params = ('program' => 'wublastn',

Just a quick possibility - do you actuall have an executable file called 
"wublastn", and is it in /home/wustl/wu-blast ?

Because in my wu-blast installation, it's called just "blastn" (which 
itself is a symlink to the real multipurpose exe called "blasta").

> my $blast_report = $factory->wublast($input);


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