[Bioperl-l] Bio::DB::Fasta index

Bernd Web bernd.web at gmail.com
Sat Nov 11 08:53:55 EST 2006


Hi,

A maybe strange question: is it possible to force Bio::DB::Fasta NOT
to index the fasta file at any time (if there is already an index)? In
the doc (http://doc.bioperl.org/releases/bioperl-current/bioperl-live/Bio/DB/Fasta.html),
I read: " If one of the source fasta files is updated, the module
reindexes just that one file. (You can also force reindexing
manually)."

Can I also switch off reindexing? (I realize that with
Bio::Index::Fasta indexing can be separated).

bernd


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