[Bioperl-l] Parsing the CDS join or complement statements to get the sub-locations
joannec at bii.a-star.edu.sg
Wed Nov 15 21:11:31 EST 2006
I am a new user to BioPerl and am encountering some problems while parsing
I have read the link
and tried to implement this.
However I am encountering some problems.
Given a testcase:
This means that my file has join, complement and simple location statements.
Using Bio::Location::SplitLocationI object to get the coordinates, my output is:
The complement and simple location statements were not parsed properly. Am I
using the right BioPerl module to parse? Kindly assist on the appropriate steps
to retrieve all 3 different location types. Thanks!
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