[Bioperl-l] indexing whole genbank

Chris Fields cjfields at uiuc.edu
Thu Nov 16 10:31:08 EST 2006

> Hello,
> I wrote to this list before because I wasn´t able to index 
> the whole of genebank. I´ve tried to do it spliting the work 
> by creating small indexes and it has worked perfectly so that 
> seems the way to do it.
> Thanks for your comments,
> Guillermo 

Thanks for the update.  I think that the problem was a full GenBank file is
way too large for flatfile indexing (I think it's around 800 GB unpacked
now).  Nice to know doing it by divisions works.


Christopher Fields
Postdoctoral Researcher - Switzer Lab
Dept. of Biochemistry
University of Illinois Urbana-Champaign 

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