[Bioperl-l] reverse complement - and features
roy at colibase.bham.ac.uk
Thu Nov 16 11:49:49 EST 2006
> that method sounds promising, although the documentation seems to be
> copy-and-paste from the trunc_with_features() method.
Yes, I was a bit lazy with that. It has been fixed in CVS (thanks Chris)
and will be included in the new 1.5.2 release.
> I included in my script, although it doesn't complaint but no being
> there, it doesn't do anything with the file.
> I looked at the version of bioperl in the server where I'm running,
> and it is 1.5.0 and the SeqUtils.pm does not include the
> Do you know if I can install the SeqUtils.pm module in my directory,
> and call it with use lib "/home/xxxx/xxxx/lib/perl"; ?
Yes, that should work. You can download the most recent version from:
You can put that file in the directory /home/xxxx/xxxx/lib/perl/Bio/ and
it should then be recognised as the preferred Bio::SeqUtils module if
you use lib as you say.
Good luck with it.
Dr. Roy Chaudhuri
Bioinformatics Research Fellow
Division of Immunity and Infection
University of Birmingham, U.K.
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