[Bioperl-l] Bioperl 1.5.2 RC1
cjfields at uiuc.edu
Mon Oct 2 23:50:47 EDT 2006
So far all tests pass on Mac OS X. I'll add this to the release page.
This RC will throw warnings for four tests I didn't remove in time
(BPlite.t, BPpsilite, BPbl2seq.t, and RestrictionEnzyme.t), which
correspond to their namesake deprecated Bio::Tools modules. These
are no longer in CVS HEAD so should be gone by the next RC, and the
relevant modules marked for deprecation.
I can verify the Bio::DB::SeqFeature.t warning on Mac OS X that
Florin reported, but ESEFinder.t works fine:
t/BioDBSeqFeature............Argument "+" isn't numeric in numeric lt
(<) at Bio/DB/SeqFeature/Segment.pm line 423.
I'll report WinXP tests tomorrow on the wiki.
On Oct 2, 2006, at 6:48 PM, Sendu Bala wrote:
> Bioperl 1.5.2 Release Candidate 1 is ready and available in CVS. I'll
> upload tar.gz files when I have access to the server, then reply here
> with links.
> In the mean time, see http://www.bioperl.org/wiki/Release_1.5.2 for
> instructions on getting and testing this RC.
> Make sure you're in the AUTHORS file in all 4 packages, as
> Even though 1.5.2 is a 'developer' release, we consider it the most
> stable and capable version of Bioperl, and recommend that you use
> it in all but the most critical production environments. Please
> try it out and let us know of any problems or difficulties you run
> Thank you,
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign
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