[Bioperl-l] No "new" method in Bio::Tool::Run::AnalysisFactor::Pise?
cjfields at uiuc.edu
Tue Oct 10 16:30:16 EDT 2006
On Oct 10, 2006, at 2:42 PM, zhihua li wrote:
> Hi netters.
> I've installed Bioperl 1.5.1, both core and run modules. But when
> I tried to use the Pise module, an error occured saying that
> there's no "new" method in this package.
> My script is:
> use strict;
> use warnings;
> use Bio::Tools::Run::AnalysisFactory::Pise;
> my $factory = Bio::Tools::Run::AnalysisFactor::Pise->new();
> my $program=$factory->program('mfold');
> my $job = $program->run();
> print STDERR $job->contect('mfold.out');
> The error message I got is:
> Can't locate object method "new" via package
> "Bio::Tools::Run::AnalysisFactor::Pise" (perhaps you forgot to load
> I checked the module file at ..../Bio/Tools/Run/AnalysisFactor/
> Pise.pm and it DOES contain a sub new.
> So what's going on? Anyone could give me a hint?
> Thanks a lot!
Well, according to your error output you have AnalysisFactory
misspelled ('AnalysisFactor'), which should tell you what the problem
is. Look for the same thing in your script.
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